I liked your alternate version. Not all of it was *necessary* to change (as I liked AOTC as is), but I loved your idea of getting Obi Wan from Dex's to Yoda quickly - maybe intercut with Anakin telling Padme about going to Tatooine (I see it like 'The Council wanted me to take you somewhere safe - I'll take you home to my mom...'

then lead into the two 'detective/mystery' stories: 1. Search for Anakin's mom (which would really be a great way to introduce the love story - great idea!) 2. Obi Wan prowls around Kamino checking out their clones
Everybody ends up where they need to be anyway!
Good ideas there...now get Lucas to let you write EP3! ;o))
Scott